| blib/lib/Bio/GeneDesign/Codons.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| subroutine | 20 | 26 | 76.9 |
| pod | n/a | ||
| line | count | pod | subroutine |
|---|---|---|---|
| 26 | 11 | n/a | BEGIN |
| 27 | 11 | n/a | BEGIN |
| 28 | 11 | n/a | BEGIN |
| 29 | 11 | n/a | BEGIN |
| 30 | 11 | n/a | BEGIN |
| 32 | 11 | n/a | BEGIN |
| 33 | 11 | n/a | BEGIN |
| 37 | 11 | n/a | BEGIN |
| 69 | 0 | n/a | _parse_organisms |
| 95 | 14 | n/a | _parse_codon_file |
| 131 | 7 | n/a | _reverse_codon_table |
| 151 | 15 | n/a | _translate |
| 170 | 3 | n/a | _subtract |
| 242 | 121 | n/a | _rscu_sum |
| 264 | 3 | n/a | _codon_count |
| 288 | 1 | n/a | _generate_RSCU_table |
| 312 | 0 | n/a | _generate_codon_report |
| 342 | 0 | n/a | _generate_codon_file |
| 366 | 14 | n/a | _define_codons |
| 395 | 37 | n/a | _amb_translation |
| 454 | 88 | n/a | _degcodon_to_aas |
| 482 | 0 | n/a | _find_in_frame |
| 511 | 0 | n/a | _minimize_local_alignment_dp |
| 610 | 3 | n/a | _pattern_aligner |
| 657 | 1 | n/a | _pattern_adder |
| 699 | 0 | n/a | _codon_change_type |