Subroutine Coverage
| blib/lib/Bio/FastParsers/Blast/Xml/Hsp.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
21 |
31 |
67.7
|
| pod |
27 |
27 |
100.0
|
| line |
count |
pod |
subroutine |
|
4
|
7 |
n/a |
BEGIN |
|
5
|
7 |
n/a |
BEGIN |
|
9
|
7 |
n/a |
BEGIN |
|
32
|
0 |
Yes |
align_len |
|
37
|
0 |
Yes |
bit_score |
|
42
|
0 |
Yes |
density |
|
47
|
0 |
Yes |
evalue |
|
52
|
0 |
Yes |
gaps |
|
57
|
2 |
Yes |
hit_frame |
|
62
|
2421 |
Yes |
hit_from |
|
67
|
1858 |
Yes |
hit_to |
|
72
|
0 |
Yes |
hseq |
|
77
|
55 |
Yes |
identity |
|
82
|
40 |
Yes |
midline |
|
87
|
203 |
Yes |
num |
|
92
|
0 |
Yes |
pattern_from |
|
97
|
0 |
Yes |
pattern_to |
|
102
|
563 |
Yes |
positive |
|
107
|
0 |
Yes |
qseq |
|
112
|
2 |
Yes |
query_frame |
|
117
|
1858 |
Yes |
query_from |
|
122
|
1858 |
Yes |
query_to |
|
127
|
258 |
Yes |
score |
|
136
|
0 |
Yes |
expect |
|
140
|
7 |
n/a |
BEGIN |
|
145
|
1 |
Yes |
hit_strand |
|
151
|
619 |
Yes |
hit_start |
|
158
|
619 |
Yes |
hit_end |
|
165
|
1 |
Yes |
query_strand |
|
171
|
619 |
Yes |
query_start |
|
178
|
619 |
Yes |
query_end |