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/* The MIT License |
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Copyright (c) 2008, 2009, 2011 by Attractive Chaos |
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Permission is hereby granted, free of charge, to any person obtaining |
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a copy of this software and associated documentation files (the |
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"Software"), to deal in the Software without restriction, including |
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without limitation the rights to use, copy, modify, merge, publish, |
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distribute, sublicense, and/or sell copies of the Software, and to |
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permit persons to whom the Software is furnished to do so, subject to |
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the following conditions: |
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The above copyright notice and this permission notice shall be |
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included in all copies or substantial portions of the Software. |
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THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, |
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EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF |
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MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND |
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NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS |
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BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN |
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ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN |
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CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE |
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SOFTWARE. |
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*/ |
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/* |
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An example: |
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#include "khash.h" |
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KHASH_MAP_INIT_INT(32, char) |
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int main() { |
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int ret, is_missing; |
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khiter_t k; |
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khash_t(32) *h = kh_init(32); |
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k = kh_put(32, h, 5, &ret); |
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kh_value(h, k) = 10; |
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k = kh_get(32, h, 10); |
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is_missing = (k == kh_end(h)); |
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k = kh_get(32, h, 5); |
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kh_del(32, h, k); |
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for (k = kh_begin(h); k != kh_end(h); ++k) |
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if (kh_exist(h, k)) kh_value(h, k) = 1; |
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kh_destroy(32, h); |
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return 0; |
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} |
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*/ |
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/* |
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2013-05-02 (0.2.8): |
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51
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* Use quadratic probing. When the capacity is power of 2, stepping function |
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i*(i+1)/2 guarantees to traverse each bucket. It is better than double |
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hashing on cache performance and is more robust than linear probing. |
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In theory, double hashing should be more robust than quadratic probing. |
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However, my implementation is probably not for large hash tables, because |
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the second hash function is closely tied to the first hash function, |
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which reduce the effectiveness of double hashing. |
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Reference: http://research.cs.vt.edu/AVresearch/hashing/quadratic.php |
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2011-12-29 (0.2.7): |
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* Minor code clean up; no actual effect. |
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2011-09-16 (0.2.6): |
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68
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* The capacity is a power of 2. This seems to dramatically improve the |
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speed for simple keys. Thank Zilong Tan for the suggestion. Reference: |
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71
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- http://code.google.com/p/ulib/ |
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- http://nothings.org/computer/judy/ |
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* Allow to optionally use linear probing which usually has better |
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performance for random input. Double hashing is still the default as it |
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is more robust to certain non-random input. |
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* Added Wang's integer hash function (not used by default). This hash |
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function is more robust to certain non-random input. |
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2011-02-14 (0.2.5): |
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83
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* Allow to declare global functions. |
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2009-09-26 (0.2.4): |
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87
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* Improve portability |
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2008-09-19 (0.2.3): |
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91
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* Corrected the example |
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* Improved interfaces |
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2008-09-11 (0.2.2): |
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96
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* Improved speed a little in kh_put() |
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2008-09-10 (0.2.1): |
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100
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* Added kh_clear() |
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* Fixed a compiling error |
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103
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2008-09-02 (0.2.0): |
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105
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* Changed to token concatenation which increases flexibility. |
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2008-08-31 (0.1.2): |
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109
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* Fixed a bug in kh_get(), which has not been tested previously. |
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111
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2008-08-31 (0.1.1): |
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113
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* Added destructor |
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*/ |
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117
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#ifndef __AC_KHASH_H |
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#define __AC_KHASH_H |
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120
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/*! |
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@header |
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123
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Generic hash table library. |
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*/ |
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126
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#define AC_VERSION_KHASH_H "0.2.8" |
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128
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#include |
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#include |
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#include |
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132
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/* compiler specific configuration */ |
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134
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#if UINT_MAX == 0xffffffffu |
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typedef unsigned int khint32_t; |
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#elif ULONG_MAX == 0xffffffffu |
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typedef unsigned long khint32_t; |
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#endif |
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140
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#if ULONG_MAX == ULLONG_MAX |
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typedef unsigned long khint64_t; |
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#else |
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typedef unsigned long long khint64_t; |
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#endif |
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146
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#ifndef kh_inline |
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#ifdef _MSC_VER |
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#define kh_inline __inline |
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#elif defined(__GNUC__) |
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#define kh_inline __inline__ |
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#else |
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#define kh_inline |
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#endif |
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#endif /* kh_inline */ |
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156
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typedef khint32_t khint_t; |
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typedef khint_t khiter_t; |
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159
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#define __ac_isempty(flag, i) ((flag[i>>4]>>((i&0xfU)<<1))&2) |
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#define __ac_isdel(flag, i) ((flag[i>>4]>>((i&0xfU)<<1))&1) |
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#define __ac_iseither(flag, i) ((flag[i>>4]>>((i&0xfU)<<1))&3) |
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162
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#define __ac_set_isdel_false(flag, i) (flag[i>>4]&=~(1ul<<((i&0xfU)<<1))) |
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#define __ac_set_isempty_false(flag, i) (flag[i>>4]&=~(2ul<<((i&0xfU)<<1))) |
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#define __ac_set_isboth_false(flag, i) (flag[i>>4]&=~(3ul<<((i&0xfU)<<1))) |
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#define __ac_set_isdel_true(flag, i) (flag[i>>4]|=1ul<<((i&0xfU)<<1)) |
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166
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167
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#define __ac_fsize(m) ((m) < 16? 1 : (m)>>4) |
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168
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169
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#ifndef kroundup32 |
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#define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(x)) |
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#endif |
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172
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173
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#ifndef kcalloc |
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#define kcalloc(N,Z) calloc(N,Z) |
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175
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#endif |
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176
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#ifndef kmalloc |
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#define kmalloc(Z) malloc(Z) |
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178
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#endif |
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179
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#ifndef krealloc |
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#define krealloc(P,Z) realloc(P,Z) |
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181
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#endif |
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182
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#ifndef kreallocarray |
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183
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#define kreallocarray(P,N,Z) ((SIZE_MAX - N < Z) ? NULL : krealloc(P, (N*Z))) |
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184
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#endif |
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185
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#ifndef kfree |
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186
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#define kfree(P) free(P) |
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187
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#endif |
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188
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189
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static const double __ac_HASH_UPPER = 0.77; |
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190
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191
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#define __KHASH_TYPE(name, khkey_t, khval_t) \ |
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192
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typedef struct kh_##name##_s { \ |
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193
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khint_t n_buckets, size, n_occupied, upper_bound; \ |
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194
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khint32_t *flags; \ |
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195
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khkey_t *keys; \ |
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196
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khval_t *vals; \ |
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197
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} kh_##name##_t; |
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198
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199
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#define __KHASH_PROTOTYPES(name, khkey_t, khval_t) \ |
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200
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extern kh_##name##_t *kh_init_##name(void); \ |
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201
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extern void kh_destroy_##name(kh_##name##_t *h); \ |
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202
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extern void kh_clear_##name(kh_##name##_t *h); \ |
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203
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extern khint_t kh_get_##name(const kh_##name##_t *h, khkey_t key); \ |
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204
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extern int kh_resize_##name(kh_##name##_t *h, khint_t new_n_buckets); \ |
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205
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extern khint_t kh_put_##name(kh_##name##_t *h, khkey_t key, int *ret); \ |
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206
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extern void kh_del_##name(kh_##name##_t *h, khint_t x); |
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207
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208
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#define __KHASH_IMPL(name, SCOPE, khkey_t, khval_t, kh_is_map, __hash_func, __hash_equal) \ |
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209
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SCOPE kh_##name##_t *kh_init_##name(void) { \ |
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210
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return (kh_##name##_t*)kcalloc(1, sizeof(kh_##name##_t)); \ |
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211
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} \ |
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212
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SCOPE void kh_destroy_##name(kh_##name##_t *h) \ |
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213
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{ \ |
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214
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if (h) { \ |
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215
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kfree((void *)h->keys); kfree(h->flags); \ |
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216
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kfree((void *)h->vals); \ |
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217
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kfree(h); \ |
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218
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} \ |
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219
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} \ |
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220
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SCOPE void kh_clear_##name(kh_##name##_t *h) \ |
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221
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{ \ |
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222
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if (h && h->flags) { \ |
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223
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memset(h->flags, 0xaa, __ac_fsize(h->n_buckets) * sizeof(khint32_t)); \ |
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224
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h->size = h->n_occupied = 0; \ |
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225
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} \ |
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226
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} \ |
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227
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SCOPE khint_t kh_get_##name(const kh_##name##_t *h, khkey_t key) \ |
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228
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{ \ |
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229
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if (h->n_buckets) { \ |
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230
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khint_t k, i, last, mask, step = 0; \ |
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231
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mask = h->n_buckets - 1; \ |
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232
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k = __hash_func(key); i = k & mask; \ |
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233
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last = i; \ |
|
234
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while (!__ac_isempty(h->flags, i) && (__ac_isdel(h->flags, i) || !__hash_equal(h->keys[i], key))) { \ |
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235
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i = (i + (++step)) & mask; \ |
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236
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if (i == last) return h->n_buckets; \ |
|
237
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} \ |
|
238
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return __ac_iseither(h->flags, i)? h->n_buckets : i; \ |
|
239
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} else return 0; \ |
|
240
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} \ |
|
241
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SCOPE int kh_resize_##name(kh_##name##_t *h, khint_t new_n_buckets) \ |
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242
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{ /* This function uses 0.25*n_buckets bytes of working space instead of [sizeof(key_t+val_t)+.25]*n_buckets. */ \ |
|
243
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khint32_t *new_flags = 0; \ |
|
244
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khint_t j = 1; \ |
|
245
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|
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{ \ |
|
246
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kroundup32(new_n_buckets); \ |
|
247
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if (new_n_buckets < 4) new_n_buckets = 4; \ |
|
248
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if (h->size >= (khint_t)(new_n_buckets * __ac_HASH_UPPER + 0.5)) j = 0; /* requested size is too small */ \ |
|
249
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else { /* hash table size to be changed (shrink or expand); rehash */ \ |
|
250
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new_flags = (khint32_t*)kreallocarray(NULL, __ac_fsize(new_n_buckets), sizeof(khint32_t)); \ |
|
251
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if (!new_flags) return -1; \ |
|
252
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memset(new_flags, 0xaa, __ac_fsize(new_n_buckets) * sizeof(khint32_t)); \ |
|
253
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|
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if (h->n_buckets < new_n_buckets) { /* expand */ \ |
|
254
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|
khkey_t *new_keys = (khkey_t*)kreallocarray((void *)h->keys, new_n_buckets, sizeof(khkey_t)); \ |
|
255
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|
|
if (!new_keys) { kfree(new_flags); return -1; } \ |
|
256
|
|
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|
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|
|
h->keys = new_keys; \ |
|
257
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|
|
|
if (kh_is_map) { \ |
|
258
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|
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|
khval_t *new_vals = (khval_t*)kreallocarray((void *)h->vals, new_n_buckets, sizeof(khval_t)); \ |
|
259
|
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|
|
if (!new_vals) { kfree(new_flags); return -1; } \ |
|
260
|
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|
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|
|
h->vals = new_vals; \ |
|
261
|
|
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|
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|
|
} \ |
|
262
|
|
|
|
|
|
|
} /* otherwise shrink */ \ |
|
263
|
|
|
|
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|
|
} \ |
|
264
|
|
|
|
|
|
|
} \ |
|
265
|
|
|
|
|
|
|
if (j) { /* rehashing is needed */ \ |
|
266
|
|
|
|
|
|
|
for (j = 0; j != h->n_buckets; ++j) { \ |
|
267
|
|
|
|
|
|
|
if (__ac_iseither(h->flags, j) == 0) { \ |
|
268
|
|
|
|
|
|
|
khkey_t key = h->keys[j]; \ |
|
269
|
|
|
|
|
|
|
khval_t val; \ |
|
270
|
|
|
|
|
|
|
khint_t new_mask; \ |
|
271
|
|
|
|
|
|
|
new_mask = new_n_buckets - 1; \ |
|
272
|
|
|
|
|
|
|
if (kh_is_map) val = h->vals[j]; \ |
|
273
|
|
|
|
|
|
|
__ac_set_isdel_true(h->flags, j); \ |
|
274
|
|
|
|
|
|
|
while (1) { /* kick-out process; sort of like in Cuckoo hashing */ \ |
|
275
|
|
|
|
|
|
|
khint_t k, i, step = 0; \ |
|
276
|
|
|
|
|
|
|
k = __hash_func(key); \ |
|
277
|
|
|
|
|
|
|
i = k & new_mask; \ |
|
278
|
|
|
|
|
|
|
while (!__ac_isempty(new_flags, i)) i = (i + (++step)) & new_mask; \ |
|
279
|
|
|
|
|
|
|
__ac_set_isempty_false(new_flags, i); \ |
|
280
|
|
|
|
|
|
|
if (i < h->n_buckets && __ac_iseither(h->flags, i) == 0) { /* kick out the existing element */ \ |
|
281
|
|
|
|
|
|
|
{ khkey_t tmp = h->keys[i]; h->keys[i] = key; key = tmp; } \ |
|
282
|
|
|
|
|
|
|
if (kh_is_map) { khval_t tmp = h->vals[i]; h->vals[i] = val; val = tmp; } \ |
|
283
|
|
|
|
|
|
|
__ac_set_isdel_true(h->flags, i); /* mark it as deleted in the old hash table */ \ |
|
284
|
|
|
|
|
|
|
} else { /* write the element and jump out of the loop */ \ |
|
285
|
|
|
|
|
|
|
h->keys[i] = key; \ |
|
286
|
|
|
|
|
|
|
if (kh_is_map) h->vals[i] = val; \ |
|
287
|
|
|
|
|
|
|
break; \ |
|
288
|
|
|
|
|
|
|
} \ |
|
289
|
|
|
|
|
|
|
} \ |
|
290
|
|
|
|
|
|
|
} \ |
|
291
|
|
|
|
|
|
|
} \ |
|
292
|
|
|
|
|
|
|
if (h->n_buckets > new_n_buckets) { /* shrink the hash table */ \ |
|
293
|
|
|
|
|
|
|
h->keys = (khkey_t*)kreallocarray((void *)h->keys, new_n_buckets, sizeof(khkey_t)); \ |
|
294
|
|
|
|
|
|
|
if (kh_is_map) h->vals = (khval_t*)kreallocarray((void *)h->vals, new_n_buckets, sizeof(khval_t)); \ |
|
295
|
|
|
|
|
|
|
} \ |
|
296
|
|
|
|
|
|
|
kfree(h->flags); /* free the working space */ \ |
|
297
|
|
|
|
|
|
|
h->flags = new_flags; \ |
|
298
|
|
|
|
|
|
|
h->n_buckets = new_n_buckets; \ |
|
299
|
|
|
|
|
|
|
h->n_occupied = h->size; \ |
|
300
|
|
|
|
|
|
|
h->upper_bound = (khint_t)(h->n_buckets * __ac_HASH_UPPER + 0.5); \ |
|
301
|
|
|
|
|
|
|
} \ |
|
302
|
|
|
|
|
|
|
return 0; \ |
|
303
|
|
|
|
|
|
|
} \ |
|
304
|
|
|
|
|
|
|
SCOPE khint_t kh_put_##name(kh_##name##_t *h, khkey_t key, int *ret) \ |
|
305
|
|
|
|
|
|
|
{ \ |
|
306
|
|
|
|
|
|
|
khint_t x; \ |
|
307
|
|
|
|
|
|
|
if (h->n_occupied >= h->upper_bound) { /* update the hash table */ \ |
|
308
|
|
|
|
|
|
|
if (h->n_buckets > (h->size<<1)) { \ |
|
309
|
|
|
|
|
|
|
if (kh_resize_##name(h, h->n_buckets - 1) < 0) { /* clear "deleted" elements */ \ |
|
310
|
|
|
|
|
|
|
*ret = -1; return h->n_buckets; \ |
|
311
|
|
|
|
|
|
|
} \ |
|
312
|
|
|
|
|
|
|
} else if (kh_resize_##name(h, h->n_buckets + 1) < 0) { /* expand the hash table */ \ |
|
313
|
|
|
|
|
|
|
*ret = -1; return h->n_buckets; \ |
|
314
|
|
|
|
|
|
|
} \ |
|
315
|
|
|
|
|
|
|
} /* TODO: to implement automatically shrinking; resize() already support shrinking */ \ |
|
316
|
|
|
|
|
|
|
{ \ |
|
317
|
|
|
|
|
|
|
khint_t k, i, site, last, mask = h->n_buckets - 1, step = 0; \ |
|
318
|
|
|
|
|
|
|
x = site = h->n_buckets; k = __hash_func(key); i = k & mask; \ |
|
319
|
|
|
|
|
|
|
if (__ac_isempty(h->flags, i)) x = i; /* for speed up */ \ |
|
320
|
|
|
|
|
|
|
else { \ |
|
321
|
|
|
|
|
|
|
last = i; \ |
|
322
|
|
|
|
|
|
|
while (!__ac_isempty(h->flags, i) && (__ac_isdel(h->flags, i) || !__hash_equal(h->keys[i], key))) { \ |
|
323
|
|
|
|
|
|
|
if (__ac_isdel(h->flags, i)) site = i; \ |
|
324
|
|
|
|
|
|
|
i = (i + (++step)) & mask; \ |
|
325
|
|
|
|
|
|
|
if (i == last) { x = site; break; } \ |
|
326
|
|
|
|
|
|
|
} \ |
|
327
|
|
|
|
|
|
|
if (x == h->n_buckets) { \ |
|
328
|
|
|
|
|
|
|
if (__ac_isempty(h->flags, i) && site != h->n_buckets) x = site; \ |
|
329
|
|
|
|
|
|
|
else x = i; \ |
|
330
|
|
|
|
|
|
|
} \ |
|
331
|
|
|
|
|
|
|
} \ |
|
332
|
|
|
|
|
|
|
} \ |
|
333
|
|
|
|
|
|
|
if (__ac_isempty(h->flags, x)) { /* not present at all */ \ |
|
334
|
|
|
|
|
|
|
h->keys[x] = key; \ |
|
335
|
|
|
|
|
|
|
__ac_set_isboth_false(h->flags, x); \ |
|
336
|
|
|
|
|
|
|
++h->size; ++h->n_occupied; \ |
|
337
|
|
|
|
|
|
|
*ret = 1; \ |
|
338
|
|
|
|
|
|
|
} else if (__ac_isdel(h->flags, x)) { /* deleted */ \ |
|
339
|
|
|
|
|
|
|
h->keys[x] = key; \ |
|
340
|
|
|
|
|
|
|
__ac_set_isboth_false(h->flags, x); \ |
|
341
|
|
|
|
|
|
|
++h->size; \ |
|
342
|
|
|
|
|
|
|
*ret = 2; \ |
|
343
|
|
|
|
|
|
|
} else *ret = 0; /* Don't touch h->keys[x] if present and not deleted */ \ |
|
344
|
|
|
|
|
|
|
return x; \ |
|
345
|
|
|
|
|
|
|
} \ |
|
346
|
|
|
|
|
|
|
SCOPE void kh_del_##name(kh_##name##_t *h, khint_t x) \ |
|
347
|
|
|
|
|
|
|
{ \ |
|
348
|
|
|
|
|
|
|
if (x != h->n_buckets && !__ac_iseither(h->flags, x)) { \ |
|
349
|
|
|
|
|
|
|
__ac_set_isdel_true(h->flags, x); \ |
|
350
|
|
|
|
|
|
|
--h->size; \ |
|
351
|
|
|
|
|
|
|
} \ |
|
352
|
|
|
|
|
|
|
} |
|
353
|
|
|
|
|
|
|
|
|
354
|
|
|
|
|
|
|
#define KHASH_DECLARE(name, khkey_t, khval_t) \ |
|
355
|
|
|
|
|
|
|
__KHASH_TYPE(name, khkey_t, khval_t) \ |
|
356
|
|
|
|
|
|
|
__KHASH_PROTOTYPES(name, khkey_t, khval_t) |
|
357
|
|
|
|
|
|
|
|
|
358
|
|
|
|
|
|
|
#define KHASH_INIT2(name, SCOPE, khkey_t, khval_t, kh_is_map, __hash_func, __hash_equal) \ |
|
359
|
|
|
|
|
|
|
__KHASH_TYPE(name, khkey_t, khval_t) \ |
|
360
|
|
|
|
|
|
|
__KHASH_IMPL(name, SCOPE, khkey_t, khval_t, kh_is_map, __hash_func, __hash_equal) |
|
361
|
|
|
|
|
|
|
|
|
362
|
|
|
|
|
|
|
#define KHASH_INIT(name, khkey_t, khval_t, kh_is_map, __hash_func, __hash_equal) \ |
|
363
|
|
|
|
|
|
|
KHASH_INIT2(name, static kh_inline, khkey_t, khval_t, kh_is_map, __hash_func, __hash_equal) |
|
364
|
|
|
|
|
|
|
|
|
365
|
|
|
|
|
|
|
/* --- BEGIN OF HASH FUNCTIONS --- */ |
|
366
|
|
|
|
|
|
|
|
|
367
|
|
|
|
|
|
|
/*! @function |
|
368
|
|
|
|
|
|
|
@abstract Integer hash function |
|
369
|
|
|
|
|
|
|
@param key The integer [khint32_t] |
|
370
|
|
|
|
|
|
|
@return The hash value [khint_t] |
|
371
|
|
|
|
|
|
|
*/ |
|
372
|
|
|
|
|
|
|
#define kh_int_hash_func(key) (khint32_t)(key) |
|
373
|
|
|
|
|
|
|
/*! @function |
|
374
|
|
|
|
|
|
|
@abstract Integer comparison function |
|
375
|
|
|
|
|
|
|
*/ |
|
376
|
|
|
|
|
|
|
#define kh_int_hash_equal(a, b) ((a) == (b)) |
|
377
|
|
|
|
|
|
|
/*! @function |
|
378
|
|
|
|
|
|
|
@abstract 64-bit integer hash function |
|
379
|
|
|
|
|
|
|
@param key The integer [khint64_t] |
|
380
|
|
|
|
|
|
|
@return The hash value [khint_t] |
|
381
|
|
|
|
|
|
|
*/ |
|
382
|
|
|
|
|
|
|
#define kh_int64_hash_func(key) (khint32_t)((key)>>33^(key)^(key)<<11) |
|
383
|
|
|
|
|
|
|
/*! @function |
|
384
|
|
|
|
|
|
|
@abstract 64-bit integer comparison function |
|
385
|
|
|
|
|
|
|
*/ |
|
386
|
|
|
|
|
|
|
#define kh_int64_hash_equal(a, b) ((a) == (b)) |
|
387
|
|
|
|
|
|
|
/*! @function |
|
388
|
|
|
|
|
|
|
@abstract const char* hash function |
|
389
|
|
|
|
|
|
|
@param s Pointer to a null terminated string |
|
390
|
|
|
|
|
|
|
@return The hash value |
|
391
|
|
|
|
|
|
|
*/ |
|
392
|
58854
|
|
|
|
|
|
static kh_inline khint_t __ac_X31_hash_string(const char *s) |
|
393
|
|
|
|
|
|
|
{ |
|
394
|
58854
|
|
|
|
|
|
khint_t h = (khint_t)*s; |
|
395
|
892044
|
50
|
|
|
|
|
if (h) for (++s ; *s; ++s) h = (h << 5) - h + (khint_t)*s; |
|
|
|
100
|
|
|
|
|
|
|
396
|
58854
|
|
|
|
|
|
return h; |
|
397
|
|
|
|
|
|
|
} |
|
398
|
|
|
|
|
|
|
/*! @function |
|
399
|
|
|
|
|
|
|
@abstract Another interface to const char* hash function |
|
400
|
|
|
|
|
|
|
@param key Pointer to a null terminated string [const char*] |
|
401
|
|
|
|
|
|
|
@return The hash value [khint_t] |
|
402
|
|
|
|
|
|
|
*/ |
|
403
|
|
|
|
|
|
|
#define kh_str_hash_func(key) __ac_X31_hash_string(key) |
|
404
|
|
|
|
|
|
|
/*! @function |
|
405
|
|
|
|
|
|
|
@abstract Const char* comparison function |
|
406
|
|
|
|
|
|
|
*/ |
|
407
|
|
|
|
|
|
|
#define kh_str_hash_equal(a, b) (strcmp(a, b) == 0) |
|
408
|
|
|
|
|
|
|
|
|
409
|
|
|
|
|
|
|
static kh_inline khint_t __ac_Wang_hash(khint_t key) |
|
410
|
|
|
|
|
|
|
{ |
|
411
|
|
|
|
|
|
|
key += ~(key << 15); |
|
412
|
|
|
|
|
|
|
key ^= (key >> 10); |
|
413
|
|
|
|
|
|
|
key += (key << 3); |
|
414
|
|
|
|
|
|
|
key ^= (key >> 6); |
|
415
|
|
|
|
|
|
|
key += ~(key << 11); |
|
416
|
|
|
|
|
|
|
key ^= (key >> 16); |
|
417
|
|
|
|
|
|
|
return key; |
|
418
|
|
|
|
|
|
|
} |
|
419
|
|
|
|
|
|
|
#define kh_int_hash_func2(k) __ac_Wang_hash((khint_t)key) |
|
420
|
|
|
|
|
|
|
|
|
421
|
|
|
|
|
|
|
/* --- END OF HASH FUNCTIONS --- */ |
|
422
|
|
|
|
|
|
|
|
|
423
|
|
|
|
|
|
|
/* Other convenient macros... */ |
|
424
|
|
|
|
|
|
|
|
|
425
|
|
|
|
|
|
|
/*! |
|
426
|
|
|
|
|
|
|
@abstract Type of the hash table. |
|
427
|
|
|
|
|
|
|
@param name Name of the hash table [symbol] |
|
428
|
|
|
|
|
|
|
*/ |
|
429
|
|
|
|
|
|
|
#define khash_t(name) kh_##name##_t |
|
430
|
|
|
|
|
|
|
|
|
431
|
|
|
|
|
|
|
/*! @function |
|
432
|
|
|
|
|
|
|
@abstract Initiate a hash table. |
|
433
|
|
|
|
|
|
|
@param name Name of the hash table [symbol] |
|
434
|
|
|
|
|
|
|
@return Pointer to the hash table [khash_t(name)*] |
|
435
|
|
|
|
|
|
|
*/ |
|
436
|
|
|
|
|
|
|
#define kh_init(name) kh_init_##name() |
|
437
|
|
|
|
|
|
|
|
|
438
|
|
|
|
|
|
|
/*! @function |
|
439
|
|
|
|
|
|
|
@abstract Destroy a hash table. |
|
440
|
|
|
|
|
|
|
@param name Name of the hash table [symbol] |
|
441
|
|
|
|
|
|
|
@param h Pointer to the hash table [khash_t(name)*] |
|
442
|
|
|
|
|
|
|
*/ |
|
443
|
|
|
|
|
|
|
#define kh_destroy(name, h) kh_destroy_##name(h) |
|
444
|
|
|
|
|
|
|
|
|
445
|
|
|
|
|
|
|
/*! @function |
|
446
|
|
|
|
|
|
|
@abstract Reset a hash table without deallocating memory. |
|
447
|
|
|
|
|
|
|
@param name Name of the hash table [symbol] |
|
448
|
|
|
|
|
|
|
@param h Pointer to the hash table [khash_t(name)*] |
|
449
|
|
|
|
|
|
|
*/ |
|
450
|
|
|
|
|
|
|
#define kh_clear(name, h) kh_clear_##name(h) |
|
451
|
|
|
|
|
|
|
|
|
452
|
|
|
|
|
|
|
/*! @function |
|
453
|
|
|
|
|
|
|
@abstract Resize a hash table. |
|
454
|
|
|
|
|
|
|
@param name Name of the hash table [symbol] |
|
455
|
|
|
|
|
|
|
@param h Pointer to the hash table [khash_t(name)*] |
|
456
|
|
|
|
|
|
|
@param s New size [khint_t] |
|
457
|
|
|
|
|
|
|
*/ |
|
458
|
|
|
|
|
|
|
#define kh_resize(name, h, s) kh_resize_##name(h, s) |
|
459
|
|
|
|
|
|
|
|
|
460
|
|
|
|
|
|
|
/*! @function |
|
461
|
|
|
|
|
|
|
@abstract Insert a key to the hash table. |
|
462
|
|
|
|
|
|
|
@param name Name of the hash table [symbol] |
|
463
|
|
|
|
|
|
|
@param h Pointer to the hash table [khash_t(name)*] |
|
464
|
|
|
|
|
|
|
@param k Key [type of keys] |
|
465
|
|
|
|
|
|
|
@param r Extra return code: -1 if the operation failed; |
|
466
|
|
|
|
|
|
|
0 if the key is present in the hash table; |
|
467
|
|
|
|
|
|
|
1 if the bucket is empty (never used); 2 if the element in |
|
468
|
|
|
|
|
|
|
the bucket has been deleted [int*] |
|
469
|
|
|
|
|
|
|
@return Iterator to the inserted element [khint_t] |
|
470
|
|
|
|
|
|
|
*/ |
|
471
|
|
|
|
|
|
|
#define kh_put(name, h, k, r) kh_put_##name(h, k, r) |
|
472
|
|
|
|
|
|
|
|
|
473
|
|
|
|
|
|
|
/*! @function |
|
474
|
|
|
|
|
|
|
@abstract Retrieve a key from the hash table. |
|
475
|
|
|
|
|
|
|
@param name Name of the hash table [symbol] |
|
476
|
|
|
|
|
|
|
@param h Pointer to the hash table [khash_t(name)*] |
|
477
|
|
|
|
|
|
|
@param k Key [type of keys] |
|
478
|
|
|
|
|
|
|
@return Iterator to the found element, or kh_end(h) if the element is absent [khint_t] |
|
479
|
|
|
|
|
|
|
*/ |
|
480
|
|
|
|
|
|
|
#define kh_get(name, h, k) kh_get_##name(h, k) |
|
481
|
|
|
|
|
|
|
|
|
482
|
|
|
|
|
|
|
/*! @function |
|
483
|
|
|
|
|
|
|
@abstract Remove a key from the hash table. |
|
484
|
|
|
|
|
|
|
@param name Name of the hash table [symbol] |
|
485
|
|
|
|
|
|
|
@param h Pointer to the hash table [khash_t(name)*] |
|
486
|
|
|
|
|
|
|
@param k Iterator to the element to be deleted [khint_t] |
|
487
|
|
|
|
|
|
|
*/ |
|
488
|
|
|
|
|
|
|
#define kh_del(name, h, k) kh_del_##name(h, k) |
|
489
|
|
|
|
|
|
|
|
|
490
|
|
|
|
|
|
|
/*! @function |
|
491
|
|
|
|
|
|
|
@abstract Test whether a bucket contains data. |
|
492
|
|
|
|
|
|
|
@param h Pointer to the hash table [khash_t(name)*] |
|
493
|
|
|
|
|
|
|
@param x Iterator to the bucket [khint_t] |
|
494
|
|
|
|
|
|
|
@return 1 if containing data; 0 otherwise [int] |
|
495
|
|
|
|
|
|
|
*/ |
|
496
|
|
|
|
|
|
|
#define kh_exist(h, x) (!__ac_iseither((h)->flags, (x))) |
|
497
|
|
|
|
|
|
|
|
|
498
|
|
|
|
|
|
|
/*! @function |
|
499
|
|
|
|
|
|
|
@abstract Get key given an iterator |
|
500
|
|
|
|
|
|
|
@param h Pointer to the hash table [khash_t(name)*] |
|
501
|
|
|
|
|
|
|
@param x Iterator to the bucket [khint_t] |
|
502
|
|
|
|
|
|
|
@return Key [type of keys] |
|
503
|
|
|
|
|
|
|
*/ |
|
504
|
|
|
|
|
|
|
#define kh_key(h, x) ((h)->keys[x]) |
|
505
|
|
|
|
|
|
|
|
|
506
|
|
|
|
|
|
|
/*! @function |
|
507
|
|
|
|
|
|
|
@abstract Get value given an iterator |
|
508
|
|
|
|
|
|
|
@param h Pointer to the hash table [khash_t(name)*] |
|
509
|
|
|
|
|
|
|
@param x Iterator to the bucket [khint_t] |
|
510
|
|
|
|
|
|
|
@return Value [type of values] |
|
511
|
|
|
|
|
|
|
@discussion For hash sets, calling this results in segfault. |
|
512
|
|
|
|
|
|
|
*/ |
|
513
|
|
|
|
|
|
|
#define kh_val(h, x) ((h)->vals[x]) |
|
514
|
|
|
|
|
|
|
|
|
515
|
|
|
|
|
|
|
/*! @function |
|
516
|
|
|
|
|
|
|
@abstract Alias of kh_val() |
|
517
|
|
|
|
|
|
|
*/ |
|
518
|
|
|
|
|
|
|
#define kh_value(h, x) ((h)->vals[x]) |
|
519
|
|
|
|
|
|
|
|
|
520
|
|
|
|
|
|
|
/*! @function |
|
521
|
|
|
|
|
|
|
@abstract Get the start iterator |
|
522
|
|
|
|
|
|
|
@param h Pointer to the hash table [khash_t(name)*] |
|
523
|
|
|
|
|
|
|
@return The start iterator [khint_t] |
|
524
|
|
|
|
|
|
|
*/ |
|
525
|
|
|
|
|
|
|
#define kh_begin(h) (khint_t)(0) |
|
526
|
|
|
|
|
|
|
|
|
527
|
|
|
|
|
|
|
/*! @function |
|
528
|
|
|
|
|
|
|
@abstract Get the end iterator |
|
529
|
|
|
|
|
|
|
@param h Pointer to the hash table [khash_t(name)*] |
|
530
|
|
|
|
|
|
|
@return The end iterator [khint_t] |
|
531
|
|
|
|
|
|
|
*/ |
|
532
|
|
|
|
|
|
|
#define kh_end(h) ((h)->n_buckets) |
|
533
|
|
|
|
|
|
|
|
|
534
|
|
|
|
|
|
|
/*! @function |
|
535
|
|
|
|
|
|
|
@abstract Get the number of elements in the hash table |
|
536
|
|
|
|
|
|
|
@param h Pointer to the hash table [khash_t(name)*] |
|
537
|
|
|
|
|
|
|
@return Number of elements in the hash table [khint_t] |
|
538
|
|
|
|
|
|
|
*/ |
|
539
|
|
|
|
|
|
|
#define kh_size(h) ((h)->size) |
|
540
|
|
|
|
|
|
|
|
|
541
|
|
|
|
|
|
|
/*! @function |
|
542
|
|
|
|
|
|
|
@abstract Get the number of buckets in the hash table |
|
543
|
|
|
|
|
|
|
@param h Pointer to the hash table [khash_t(name)*] |
|
544
|
|
|
|
|
|
|
@return Number of buckets in the hash table [khint_t] |
|
545
|
|
|
|
|
|
|
*/ |
|
546
|
|
|
|
|
|
|
#define kh_n_buckets(h) ((h)->n_buckets) |
|
547
|
|
|
|
|
|
|
|
|
548
|
|
|
|
|
|
|
/*! @function |
|
549
|
|
|
|
|
|
|
@abstract Iterate over the entries in the hash table |
|
550
|
|
|
|
|
|
|
@param h Pointer to the hash table [khash_t(name)*] |
|
551
|
|
|
|
|
|
|
@param kvar Variable to which key will be assigned |
|
552
|
|
|
|
|
|
|
@param vvar Variable to which value will be assigned |
|
553
|
|
|
|
|
|
|
@param code Block of code to execute |
|
554
|
|
|
|
|
|
|
*/ |
|
555
|
|
|
|
|
|
|
#define kh_foreach(h, kvar, vvar, code) { khint_t __i; \ |
|
556
|
|
|
|
|
|
|
for (__i = kh_begin(h); __i != kh_end(h); ++__i) { \ |
|
557
|
|
|
|
|
|
|
if (!kh_exist(h,__i)) continue; \ |
|
558
|
|
|
|
|
|
|
(kvar) = kh_key(h,__i); \ |
|
559
|
|
|
|
|
|
|
(vvar) = kh_val(h,__i); \ |
|
560
|
|
|
|
|
|
|
code; \ |
|
561
|
|
|
|
|
|
|
} } |
|
562
|
|
|
|
|
|
|
|
|
563
|
|
|
|
|
|
|
/*! @function |
|
564
|
|
|
|
|
|
|
@abstract Iterate over the values in the hash table |
|
565
|
|
|
|
|
|
|
@param h Pointer to the hash table [khash_t(name)*] |
|
566
|
|
|
|
|
|
|
@param vvar Variable to which value will be assigned |
|
567
|
|
|
|
|
|
|
@param code Block of code to execute |
|
568
|
|
|
|
|
|
|
*/ |
|
569
|
|
|
|
|
|
|
#define kh_foreach_value(h, vvar, code) { khint_t __i; \ |
|
570
|
|
|
|
|
|
|
for (__i = kh_begin(h); __i != kh_end(h); ++__i) { \ |
|
571
|
|
|
|
|
|
|
if (!kh_exist(h,__i)) continue; \ |
|
572
|
|
|
|
|
|
|
(vvar) = kh_val(h,__i); \ |
|
573
|
|
|
|
|
|
|
code; \ |
|
574
|
|
|
|
|
|
|
} } |
|
575
|
|
|
|
|
|
|
|
|
576
|
|
|
|
|
|
|
/* More conenient interfaces */ |
|
577
|
|
|
|
|
|
|
|
|
578
|
|
|
|
|
|
|
/*! @function |
|
579
|
|
|
|
|
|
|
@abstract Instantiate a hash set containing integer keys |
|
580
|
|
|
|
|
|
|
@param name Name of the hash table [symbol] |
|
581
|
|
|
|
|
|
|
*/ |
|
582
|
|
|
|
|
|
|
#define KHASH_SET_INIT_INT(name) \ |
|
583
|
|
|
|
|
|
|
KHASH_INIT(name, khint32_t, char, 0, kh_int_hash_func, kh_int_hash_equal) |
|
584
|
|
|
|
|
|
|
|
|
585
|
|
|
|
|
|
|
/*! @function |
|
586
|
|
|
|
|
|
|
@abstract Instantiate a hash map containing integer keys |
|
587
|
|
|
|
|
|
|
@param name Name of the hash table [symbol] |
|
588
|
|
|
|
|
|
|
@param khval_t Type of values [type] |
|
589
|
|
|
|
|
|
|
*/ |
|
590
|
|
|
|
|
|
|
#define KHASH_MAP_INIT_INT(name, khval_t) \ |
|
591
|
|
|
|
|
|
|
KHASH_INIT(name, khint32_t, khval_t, 1, kh_int_hash_func, kh_int_hash_equal) |
|
592
|
|
|
|
|
|
|
|
|
593
|
|
|
|
|
|
|
/*! @function |
|
594
|
|
|
|
|
|
|
@abstract Instantiate a hash map containing 64-bit integer keys |
|
595
|
|
|
|
|
|
|
@param name Name of the hash table [symbol] |
|
596
|
|
|
|
|
|
|
*/ |
|
597
|
|
|
|
|
|
|
#define KHASH_SET_INIT_INT64(name) \ |
|
598
|
|
|
|
|
|
|
KHASH_INIT(name, khint64_t, char, 0, kh_int64_hash_func, kh_int64_hash_equal) |
|
599
|
|
|
|
|
|
|
|
|
600
|
|
|
|
|
|
|
/*! @function |
|
601
|
|
|
|
|
|
|
@abstract Instantiate a hash map containing 64-bit integer keys |
|
602
|
|
|
|
|
|
|
@param name Name of the hash table [symbol] |
|
603
|
|
|
|
|
|
|
@param khval_t Type of values [type] |
|
604
|
|
|
|
|
|
|
*/ |
|
605
|
|
|
|
|
|
|
#define KHASH_MAP_INIT_INT64(name, khval_t) \ |
|
606
|
|
|
|
|
|
|
KHASH_INIT(name, khint64_t, khval_t, 1, kh_int64_hash_func, kh_int64_hash_equal) |
|
607
|
|
|
|
|
|
|
|
|
608
|
|
|
|
|
|
|
typedef const char *kh_cstr_t; |
|
609
|
|
|
|
|
|
|
/*! @function |
|
610
|
|
|
|
|
|
|
@abstract Instantiate a hash map containing const char* keys |
|
611
|
|
|
|
|
|
|
@param name Name of the hash table [symbol] |
|
612
|
|
|
|
|
|
|
*/ |
|
613
|
|
|
|
|
|
|
#define KHASH_SET_INIT_STR(name) \ |
|
614
|
|
|
|
|
|
|
KHASH_INIT(name, kh_cstr_t, char, 0, kh_str_hash_func, kh_str_hash_equal) |
|
615
|
|
|
|
|
|
|
|
|
616
|
|
|
|
|
|
|
/*! @function |
|
617
|
|
|
|
|
|
|
@abstract Instantiate a hash map containing const char* keys |
|
618
|
|
|
|
|
|
|
@param name Name of the hash table [symbol] |
|
619
|
|
|
|
|
|
|
@param khval_t Type of values [type] |
|
620
|
|
|
|
|
|
|
*/ |
|
621
|
|
|
|
|
|
|
#define KHASH_MAP_INIT_STR(name, khval_t) \ |
|
622
|
|
|
|
|
|
|
KHASH_INIT(name, kh_cstr_t, khval_t, 1, kh_str_hash_func, kh_str_hash_equal) |
|
623
|
|
|
|
|
|
|
|
|
624
|
|
|
|
|
|
|
#endif /* __AC_KHASH_H */ |