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| 1 |  |  |  |  |  |  | package Lab::Moose::DataFolder; | 
| 2 |  |  |  |  |  |  | $Lab::Moose::DataFolder::VERSION = '3.900'; | 
| 3 |  |  |  |  |  |  | #ABSTRACT: Create a data directory with meta data | 
| 4 |  |  |  |  |  |  |  | 
| 5 | 27 |  |  | 27 |  | 428 | use v5.20; | 
|  | 27 |  |  |  |  | 102 |  | 
| 6 |  |  |  |  |  |  |  | 
| 7 | 27 |  |  | 27 |  | 178 | use warnings; | 
|  | 27 |  |  |  |  | 73 |  | 
|  | 27 |  |  |  |  | 964 |  | 
| 8 | 27 |  |  | 27 |  | 172 | use strict; | 
|  | 27 |  |  |  |  | 117 |  | 
|  | 27 |  |  |  |  | 644 |  | 
| 9 |  |  |  |  |  |  |  | 
| 10 | 27 |  |  | 27 |  | 163 | use Moose; | 
|  | 27 |  |  |  |  | 64 |  | 
|  | 27 |  |  |  |  | 219 |  | 
| 11 | 27 |  |  | 27 |  | 187944 | use MooseX::StrictConstructor; | 
|  | 27 |  |  |  |  | 72 |  | 
|  | 27 |  |  |  |  | 275 |  | 
| 12 | 27 |  |  | 27 |  | 90960 | use MooseX::Params::Validate; | 
|  | 27 |  |  |  |  | 83 |  | 
|  | 27 |  |  |  |  | 284 |  | 
| 13 |  |  |  |  |  |  |  | 
| 14 | 27 |  |  | 27 |  | 13001 | use Carp; | 
|  | 27 |  |  |  |  | 86 |  | 
|  | 27 |  |  |  |  | 1992 |  | 
| 15 |  |  |  |  |  |  |  | 
| 16 | 27 |  |  | 27 |  | 13107 | use Lab::Moose::Catfile 'our_catfile'; | 
|  | 27 |  |  |  |  | 95 |  | 
|  | 27 |  |  |  |  | 1772 |  | 
| 17 | 27 |  |  | 27 |  | 241 | use File::Basename qw/basename dirname/; | 
|  | 27 |  |  |  |  | 62 |  | 
|  | 27 |  |  |  |  | 2306 |  | 
| 18 | 27 |  |  | 27 |  | 14223 | use File::Copy 'copy'; | 
|  | 27 |  |  |  |  | 66703 |  | 
|  | 27 |  |  |  |  | 1688 |  | 
| 19 | 27 |  |  | 27 |  | 224 | use List::Util 'max'; | 
|  | 27 |  |  |  |  | 73 |  | 
|  | 27 |  |  |  |  | 1713 |  | 
| 20 | 27 |  |  | 27 |  | 12660 | use Sys::Hostname; | 
|  | 27 |  |  |  |  | 30349 |  | 
|  | 27 |  |  |  |  | 1780 |  | 
| 21 | 27 |  |  | 27 |  | 230 | use Time::HiRes qw/gettimeofday tv_interval/; | 
|  | 27 |  |  |  |  | 64 |  | 
|  | 27 |  |  |  |  | 623 |  | 
| 22 | 27 |  |  | 27 |  | 4420 | use POSIX qw/strftime/; | 
|  | 27 |  |  |  |  | 79 |  | 
|  | 27 |  |  |  |  | 218 |  | 
| 23 | 27 |  |  | 27 |  | 46962 | use namespace::autoclean; | 
|  | 27 |  |  |  |  | 69 |  | 
|  | 27 |  |  |  |  | 233 |  | 
| 24 | 27 |  |  | 27 |  | 3382 | use Encode 'decode'; | 
|  | 27 |  |  |  |  | 28603 |  | 
|  | 27 |  |  |  |  | 1559 |  | 
| 25 |  |  |  |  |  |  |  | 
| 26 | 27 |  |  | 27 |  | 763 | use utf8; | 
|  | 27 |  |  |  |  | 77 |  | 
|  | 27 |  |  |  |  | 245 |  | 
| 27 |  |  |  |  |  |  |  | 
| 28 | 27 |  |  | 27 |  | 13719 | use Lab::Moose::DataFile::Meta; | 
|  | 27 |  |  |  |  | 116 |  | 
|  | 27 |  |  |  |  | 2189 |  | 
| 29 |  |  |  |  |  |  |  | 
| 30 |  |  |  |  |  |  | # Get a copy of @ARGV, before it get's mangled by the user script. | 
| 31 |  |  |  |  |  |  |  | 
| 32 |  |  |  |  |  |  | our @ARGV_COPY; | 
| 33 |  |  |  |  |  |  |  | 
| 34 |  |  |  |  |  |  | BEGIN { | 
| 35 | 27 |  |  | 27 |  | 18726 | @ARGV_COPY = ( $0, @ARGV ); | 
| 36 |  |  |  |  |  |  | } | 
| 37 |  |  |  |  |  |  |  | 
| 38 |  |  |  |  |  |  |  | 
| 39 |  |  |  |  |  |  | has path => ( | 
| 40 |  |  |  |  |  |  | is        => 'ro', | 
| 41 |  |  |  |  |  |  | isa       => 'Str', | 
| 42 |  |  |  |  |  |  | writer    => '_path', | 
| 43 |  |  |  |  |  |  | predicate => 'has_path', | 
| 44 |  |  |  |  |  |  | ); | 
| 45 |  |  |  |  |  |  |  | 
| 46 |  |  |  |  |  |  | has date_prefix => ( | 
| 47 |  |  |  |  |  |  | is      => 'ro', | 
| 48 |  |  |  |  |  |  | isa     => 'Bool', | 
| 49 |  |  |  |  |  |  | default => 1 | 
| 50 |  |  |  |  |  |  | ); | 
| 51 |  |  |  |  |  |  |  | 
| 52 |  |  |  |  |  |  | has time_prefix => ( | 
| 53 |  |  |  |  |  |  | is      => 'ro', | 
| 54 |  |  |  |  |  |  | isa     => 'Bool', | 
| 55 |  |  |  |  |  |  | default => 1 | 
| 56 |  |  |  |  |  |  | ); | 
| 57 |  |  |  |  |  |  |  | 
| 58 |  |  |  |  |  |  | has meta_file => ( | 
| 59 |  |  |  |  |  |  | is       => 'ro', | 
| 60 |  |  |  |  |  |  | isa      => 'Lab::Moose::DataFile::Meta', | 
| 61 |  |  |  |  |  |  | init_arg => undef, | 
| 62 |  |  |  |  |  |  | writer   => '_meta_file' | 
| 63 |  |  |  |  |  |  | ); | 
| 64 |  |  |  |  |  |  |  | 
| 65 |  |  |  |  |  |  | has copy_script => ( | 
| 66 |  |  |  |  |  |  | is  => 'ro', | 
| 67 |  |  |  |  |  |  | isa => 'Bool', | 
| 68 |  |  |  |  |  |  | default => 1 | 
| 69 |  |  |  |  |  |  | ); | 
| 70 |  |  |  |  |  |  |  | 
| 71 |  |  |  |  |  |  | has script_name => ( | 
| 72 |  |  |  |  |  |  | is  => 'ro', | 
| 73 |  |  |  |  |  |  | isa => 'Str', | 
| 74 |  |  |  |  |  |  | ); | 
| 75 |  |  |  |  |  |  |  | 
| 76 |  |  |  |  |  |  | sub BUILD { | 
| 77 | 73 |  |  | 73 | 0 | 135 | my $self = shift; | 
| 78 |  |  |  |  |  |  |  | 
| 79 | 73 | 100 |  |  |  | 2582 | if ( not $self->has_path() ) { | 
| 80 | 1 |  |  |  |  | 33 | $self->_path('MEAS'); | 
| 81 |  |  |  |  |  |  | } | 
| 82 |  |  |  |  |  |  |  | 
| 83 | 73 |  |  |  |  | 2062 | my $folder   = $self->path(); | 
| 84 | 73 |  |  |  |  | 2309 | my $dirname  = dirname($folder); | 
| 85 | 73 |  |  |  |  | 1490 | my $basename = basename($folder); | 
| 86 |  |  |  |  |  |  |  | 
| 87 | 73 | 100 |  |  |  | 2283 | if ( $self->time_prefix ) { | 
| 88 | 34 |  |  |  |  | 2009 | $basename = strftime( '%H-%M-%S', localtime() ) . "_$basename"; | 
| 89 | 34 |  |  |  |  | 252 | $folder = our_catfile( $dirname, $basename ); | 
| 90 |  |  |  |  |  |  | } | 
| 91 |  |  |  |  |  |  |  | 
| 92 | 73 | 100 |  |  |  | 2249 | if ( $self->date_prefix ) { | 
| 93 | 34 |  |  |  |  | 1538 | $basename = strftime( '%Y-%m-%d', localtime() ) . "_$basename"; | 
| 94 | 34 |  |  |  |  | 182 | $folder = our_catfile( $dirname, $basename ); | 
| 95 |  |  |  |  |  |  | } | 
| 96 |  |  |  |  |  |  |  | 
| 97 | 73 |  |  |  |  | 233 | my $folder_number = _get_folder_number( | 
| 98 |  |  |  |  |  |  | basename => $basename, | 
| 99 |  |  |  |  |  |  | dirname  => $dirname | 
| 100 |  |  |  |  |  |  | ); | 
| 101 |  |  |  |  |  |  |  | 
| 102 | 73 |  |  |  |  | 491 | $folder .= sprintf( '_%03d', $folder_number ); | 
| 103 |  |  |  |  |  |  |  | 
| 104 | 73 | 50 |  |  |  | 4978 | mkdir $folder | 
| 105 |  |  |  |  |  |  | or croak "cannot make directory '$folder': $!"; | 
| 106 |  |  |  |  |  |  |  | 
| 107 | 73 |  |  |  |  | 3435 | $self->_path($folder); | 
| 108 |  |  |  |  |  |  |  | 
| 109 | 73 |  |  |  |  | 269 | $self->_create_meta_file(); | 
| 110 |  |  |  |  |  |  |  | 
| 111 | 73 | 50 |  |  |  | 3287 | if ( $self->copy_script ) { | 
| 112 | 73 |  |  |  |  | 222 | $self->_copy_user_script(); | 
| 113 |  |  |  |  |  |  | } | 
| 114 |  |  |  |  |  |  |  | 
| 115 |  |  |  |  |  |  | } | 
| 116 |  |  |  |  |  |  |  | 
| 117 |  |  |  |  |  |  | sub _copy_user_script { | 
| 118 | 73 |  |  | 73 |  | 141 | my $self   = shift; | 
| 119 | 73 |  |  |  |  | 160 | my $script = $0; | 
| 120 |  |  |  |  |  |  |  | 
| 121 | 73 |  |  |  |  | 112 | my $basename; | 
| 122 | 73 |  |  |  |  | 2066 | my $script_name = $self->script_name(); | 
| 123 |  |  |  |  |  |  |  | 
| 124 | 73 | 100 |  |  |  | 180 | if ($script_name) { | 
| 125 | 1 |  |  |  |  | 3 | $basename = $script_name; | 
| 126 |  |  |  |  |  |  | } | 
| 127 |  |  |  |  |  |  | else { | 
| 128 | 72 |  |  |  |  | 1976 | $basename = basename($script); | 
| 129 |  |  |  |  |  |  | } | 
| 130 |  |  |  |  |  |  |  | 
| 131 | 73 |  |  |  |  | 2219 | my $copy = our_catfile( $self->path, $basename ); | 
| 132 |  |  |  |  |  |  |  | 
| 133 | 73 | 50 |  |  |  | 312 | copy( $script, $copy ) | 
| 134 |  |  |  |  |  |  | or croak "copy of $script to $copy failed: $!"; | 
| 135 |  |  |  |  |  |  | } | 
| 136 |  |  |  |  |  |  |  | 
| 137 |  |  |  |  |  |  | sub _create_meta_file { | 
| 138 | 73 |  |  | 73 |  | 137 | my $self = shift; | 
| 139 | 73 |  |  |  |  | 267 | my $time = [ gettimeofday() ]; | 
| 140 |  |  |  |  |  |  |  | 
| 141 |  |  |  |  |  |  | my %meta_data = ( | 
| 142 |  |  |  |  |  |  | argv => [@ARGV_COPY], | 
| 143 |  |  |  |  |  |  |  | 
| 144 |  |  |  |  |  |  | # See http://stackoverflow.com/questions/3526420/how-do-i-get-the-current-user-in-perl-in-a-portable-way | 
| 145 |  |  |  |  |  |  | user => getlogin() || getpwuid($<), | 
| 146 |  |  |  |  |  |  | host => hostname(), | 
| 147 |  |  |  |  |  |  | date      => strftime( "%c", localtime() ), | 
| 148 | 73 |  | 33 |  |  | 17794 | timestamp => join( '.',      @{$time} ), | 
|  | 73 |  |  |  |  | 4056 |  | 
| 149 |  |  |  |  |  |  | version   => _get_version(), | 
| 150 |  |  |  |  |  |  | ); | 
| 151 |  |  |  |  |  |  |  | 
| 152 | 73 |  |  |  |  | 3232 | my $meta_file = Lab::Moose::DataFile::Meta->new( | 
| 153 |  |  |  |  |  |  | folder   => $self, | 
| 154 |  |  |  |  |  |  | filename => 'META.yml', | 
| 155 |  |  |  |  |  |  | ); | 
| 156 |  |  |  |  |  |  |  | 
| 157 | 73 |  |  |  |  | 2401 | $self->_meta_file($meta_file); | 
| 158 |  |  |  |  |  |  |  | 
| 159 | 73 |  |  |  |  | 282 | $meta_file->log( meta => \%meta_data ); | 
| 160 |  |  |  |  |  |  | } | 
| 161 |  |  |  |  |  |  |  | 
| 162 |  |  |  |  |  |  | sub _get_version { | 
| 163 | 27 |  |  | 27 |  | 333 | no strict 'vars';    ## no critic | 
|  | 27 |  |  |  |  | 65 |  | 
|  | 27 |  |  |  |  | 9093 |  | 
| 164 | 73 | 50 |  | 73 |  | 245 | if ( defined $VERSION ) { | 
| 165 | 73 |  |  |  |  | 640 | return $VERSION; | 
| 166 |  |  |  |  |  |  | } | 
| 167 |  |  |  |  |  |  | else { | 
| 168 | 0 |  |  |  |  | 0 | return 'git'; | 
| 169 |  |  |  |  |  |  | } | 
| 170 |  |  |  |  |  |  | } | 
| 171 |  |  |  |  |  |  |  | 
| 172 |  |  |  |  |  |  | sub _get_folder_number { | 
| 173 | 73 |  |  | 73 |  | 453 | my ( $basename, $dirname ) = validated_list( | 
| 174 |  |  |  |  |  |  | \@_, | 
| 175 |  |  |  |  |  |  | basename => { isa => 'Str' }, | 
| 176 |  |  |  |  |  |  | dirname  => { isa => 'Str' }, | 
| 177 |  |  |  |  |  |  | ); | 
| 178 |  |  |  |  |  |  |  | 
| 179 | 73 | 50 |  |  |  | 24037 | opendir my $dh, $dirname | 
| 180 |  |  |  |  |  |  | or croak "cannot open directory '$dirname'"; | 
| 181 |  |  |  |  |  |  |  | 
| 182 | 73 |  |  |  |  | 2659 | my @entries = readdir $dh; | 
| 183 |  |  |  |  |  |  |  | 
| 184 | 73 |  |  |  |  | 294 | @entries = map { decode( 'UTF-8', $_ ) } @entries; | 
|  | 765 |  |  |  |  | 23892 |  | 
| 185 |  |  |  |  |  |  |  | 
| 186 |  |  |  |  |  |  | my $max = max map { | 
| 187 | 73 |  |  |  |  | 2356 | my $entry = $_; | 
|  | 765 |  |  |  |  | 1216 |  | 
| 188 | 765 | 100 |  |  |  | 2828 | if ( $entry =~ /^\Q${basename}\E_([0-9]+)$/ ) { | 
| 189 | 543 |  |  |  |  | 1622 | my $num = $1; | 
| 190 |  |  |  |  |  |  | } | 
| 191 |  |  |  |  |  |  | else { | 
| 192 | 222 |  |  |  |  | 645 | my $num = 0; | 
| 193 |  |  |  |  |  |  | } | 
| 194 |  |  |  |  |  |  | } @entries; | 
| 195 |  |  |  |  |  |  |  | 
| 196 | 73 |  |  |  |  | 1497 | return $max + 1; | 
| 197 |  |  |  |  |  |  | } | 
| 198 |  |  |  |  |  |  |  | 
| 199 |  |  |  |  |  |  | __PACKAGE__->meta->make_immutable(); | 
| 200 |  |  |  |  |  |  | 1; | 
| 201 |  |  |  |  |  |  |  | 
| 202 |  |  |  |  |  |  | __END__ | 
| 203 |  |  |  |  |  |  |  | 
| 204 |  |  |  |  |  |  | =pod | 
| 205 |  |  |  |  |  |  |  | 
| 206 |  |  |  |  |  |  | =encoding UTF-8 | 
| 207 |  |  |  |  |  |  |  | 
| 208 |  |  |  |  |  |  | =head1 NAME | 
| 209 |  |  |  |  |  |  |  | 
| 210 |  |  |  |  |  |  | Lab::Moose::DataFolder - Create a data directory with meta data | 
| 211 |  |  |  |  |  |  |  | 
| 212 |  |  |  |  |  |  | =head1 VERSION | 
| 213 |  |  |  |  |  |  |  | 
| 214 |  |  |  |  |  |  | version 3.900 | 
| 215 |  |  |  |  |  |  |  | 
| 216 |  |  |  |  |  |  | =head1 DESCRIPTION | 
| 217 |  |  |  |  |  |  |  | 
| 218 |  |  |  |  |  |  | A data logging setup consists of one Lab::Moose::DataFolder and one or more | 
| 219 |  |  |  |  |  |  | L<Lab::Moose::DataFile> objects which live inside the DataFolder. | 
| 220 |  |  |  |  |  |  |  | 
| 221 |  |  |  |  |  |  | =head1 METHODS | 
| 222 |  |  |  |  |  |  |  | 
| 223 |  |  |  |  |  |  | =head2 new | 
| 224 |  |  |  |  |  |  |  | 
| 225 |  |  |  |  |  |  | my $folder = Lab::Moose::DataFolder->new(path => 'foldername'); | 
| 226 |  |  |  |  |  |  | # or equivalently use Lab::Moose loader: | 
| 227 |  |  |  |  |  |  | use Lab::Moose; my $folder = datafolder(path => 'foldername'); | 
| 228 |  |  |  |  |  |  |  | 
| 229 |  |  |  |  |  |  | The actual foldername will consist of the C<path> argument and a numeric | 
| 230 |  |  |  |  |  |  | suffix. Calling this function repeatedly will create the directories | 
| 231 |  |  |  |  |  |  | F<foldername_001>, F<foldername_002>, ..., F<foldername_999>, | 
| 232 |  |  |  |  |  |  | F<foldername_1000>. | 
| 233 |  |  |  |  |  |  |  | 
| 234 |  |  |  |  |  |  | After creation, the actual filename is contained in the C<path> attribute: | 
| 235 |  |  |  |  |  |  |  | 
| 236 |  |  |  |  |  |  | my $path = $folder->path(); | 
| 237 |  |  |  |  |  |  |  | 
| 238 |  |  |  |  |  |  | This method will create the following files in the folder: | 
| 239 |  |  |  |  |  |  |  | 
| 240 |  |  |  |  |  |  | =over | 
| 241 |  |  |  |  |  |  |  | 
| 242 |  |  |  |  |  |  | =item F<< <SCRIPT> .pl >> | 
| 243 |  |  |  |  |  |  |  | 
| 244 |  |  |  |  |  |  | A copy of the user script. You can change the name of this script by setting | 
| 245 |  |  |  |  |  |  | the C<script_name> attribute in the constructor. In case you don't want the | 
| 246 |  |  |  |  |  |  | script to be copied, just set C<copy_script> to 0 when creating your DataFolder. | 
| 247 |  |  |  |  |  |  |  | 
| 248 |  |  |  |  |  |  | =item F<META.yml> | 
| 249 |  |  |  |  |  |  |  | 
| 250 |  |  |  |  |  |  | A YAML file containing meta data. | 
| 251 |  |  |  |  |  |  | The L<Lab::Moose::DataFile::Meta> object is contained in the C<meta_file> | 
| 252 |  |  |  |  |  |  | attribute: | 
| 253 |  |  |  |  |  |  |  | 
| 254 |  |  |  |  |  |  | my $meta_file = $folder->meta_file(); | 
| 255 |  |  |  |  |  |  |  | 
| 256 |  |  |  |  |  |  | =back | 
| 257 |  |  |  |  |  |  |  | 
| 258 |  |  |  |  |  |  | =head1 COPYRIGHT AND LICENSE | 
| 259 |  |  |  |  |  |  |  | 
| 260 |  |  |  |  |  |  | This software is copyright (c) 2023 by the Lab::Measurement team; in detail: | 
| 261 |  |  |  |  |  |  |  | 
| 262 |  |  |  |  |  |  | Copyright 2016       Simon Reinhardt | 
| 263 |  |  |  |  |  |  | 2017-2018  Andreas K. Huettel, Simon Reinhardt | 
| 264 |  |  |  |  |  |  | 2020       Andreas K. Huettel | 
| 265 |  |  |  |  |  |  | 2021       Fabian Weinelt | 
| 266 |  |  |  |  |  |  |  | 
| 267 |  |  |  |  |  |  |  | 
| 268 |  |  |  |  |  |  | This is free software; you can redistribute it and/or modify it under | 
| 269 |  |  |  |  |  |  | the same terms as the Perl 5 programming language system itself. | 
| 270 |  |  |  |  |  |  |  | 
| 271 |  |  |  |  |  |  | =cut |