File Coverage

blib/lib/Bio/MUST/Provision/Mafft.pm

Criterion	Covered	Total	%
statement	13	16	81.2
branch	2	4	50.0
condition			n/a
subroutine	4	6	66.6
pod	1	3	33.3
total	20	29	68.9

package Bio::MUST::Provision::Mafft;
# ABSTRACT: Internal class for app provisioning system
$Bio::MUST::Provision::Mafft::VERSION = '0.210160';
# AUTOGENERATED CODE! DO NOT MODIFY THIS FILE!

use Modern::Perl '2011';
use Carp;

use parent qw(App::Provision::Tiny);


sub deps { return qw(brew) }

sub condition {
    my $self = shift;

    my $condition = qx{which mafft} =~ m/mafft$/xms;
    carp '[BMD] Note: MAFFT executable not found; I can try brewing it.'
        unless $condition;

    return $condition ? 1 : 0;
}

sub meet {
    my $self = shift;

    return $self->recipe(
        ['brew tap brewsci/bio'],
        ['brew install mafft'],
    );
}

1;

__END__

=pod

=head1 NAME

Bio::MUST::Provision::Mafft - Internal class for app provisioning system

=head1 VERSION

version 0.210160

=head1 AUTHOR

Denis BAURAIN <[e-mail]>

=head1 COPYRIGHT AND LICENSE

This software is copyright (c) 2013 by University of Liege / Unit of Eukaryotic Phylogenomics / Denis BAURAIN.

This is free software; you can redistribute it and/or modify it under
the same terms as the Perl 5 programming language system itself.

=cut