File Coverage

blib/lib/Bio/FastParsers/Hmmer/DomTable/Hit.pm

Criterion	Covered	Total	%
statement	6	7	85.7
branch			n/a
condition			n/a
subroutine	2	3	66.6
pod	1	1	100.0
total	9	11	81.8

package Bio::FastParsers::Hmmer::DomTable::Hit;
# ABSTRACT: Internal class for tabular HMMER domain parser
# CONTRIBUTOR: Arnaud DI FRANCO <[e-mail]>
$Bio::FastParsers::Hmmer::DomTable::Hit::VERSION = '0.201110';
use Moose;
use namespace::autoclean;

# public attributes

has $_ => (
    is       => 'ro',
    isa      => 'Str',
    required => 1,
) for qw(target_name query_name);

has $_ => (
    is       => 'ro',
    isa      => 'Maybe[Str]',
    required => 1,
) for qw(target_description target_accession query_accession);

has $_ => (
    is       => 'ro',
    isa      => 'Num',
    required => 1,
) for qw(tlen qlen evalue score bias of);

with 'Bio::FastParsers::Roles::Domainable';


sub expect {
    return shift->evalue
}


__PACKAGE__->meta->make_immutable;
1;

__END__

=pod

=head1 NAME

Bio::FastParsers::Hmmer::DomTable::Hit - Internal class for tabular HMMER domain parser

=head1 VERSION

version 0.201110

=head1 SYNOPSIS

    # TODO

=head1 DESCRIPTION

    # TODO

=head1 ALIASES

=head2 expect

Alias for C<evalue> method. For API consistency.

=head1 AUTHOR

Denis BAURAIN <[e-mail]>

=head1 CONTRIBUTOR

=for stopwords Arnaud DI FRANCO

Arnaud DI FRANCO <[e-mail]>

=head1 COPYRIGHT AND LICENSE

This software is copyright (c) 2013 by University of Liege / Unit of Eukaryotic Phylogenomics / Denis BAURAIN.

This is free software; you can redistribute it and/or modify it under
the same terms as the Perl 5 programming language system itself.

=cut